Plant Omics Agent POA
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Guide

Plant Omics Agent Guide

From deployment to the two usage paths and MCP governance.

Getting started

Quick start

/guide/quickstart Sign in and a minimal walkthrough of both usage paths. →

Usage paths

/guide/modes Choosing between manual, agent-assisted and RStudio entries. →

Modes & entries

Manual mode

/guide/manual The full manual flow from tool catalog to job submission. →

Agent-assisted mode

/guide/agent State analysis intent in natural language; governed auto-execution. →

RStudio analysis

/guide/rstudio In-browser R sessions for interactive exploration and plots. →

Analysis pipelines

Native workflows

/guide/workflow A tour of the five ready-to-run omics pipelines. →

GWAS end-to-end

/guide/gwas Genotype QC to association loci, end to end. →

Homologs & gene families

/guide/genomics Cross-species homolog search and family profiling. →

MCP & Data

MCP governance

/guide/mcp How tool registration, permissions and auditing work. →

Databases & resources

/guide/databases The 19 built-in databases and regulatory resources. →

Cases & Help

Use cases

/guide/use-cases Full analysis walkthroughs from real research scenarios. →

FAQ

/guide/faq Answers to common login, job and data questions. →